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dc.title | Improving CT image tumor segmentation through deep supervision and attentional gates | en |
dc.contributor.author | Turečková, Alžběta | |
dc.contributor.author | Tureček, Tomáš | |
dc.contributor.author | Komínková Oplatková, Zuzana | |
dc.contributor.author | Rodríguez-Sánchez, Antonio | |
dc.relation.ispartof | Frontiers in Robotics and AI | |
dc.identifier.issn | 2296-9144 Scopus Sources, Sherpa/RoMEO, JCR | |
dc.date.issued | 2020 | |
utb.relation.volume | 7 | |
dc.type | article | |
dc.language.iso | en | |
dc.publisher | Frontiers Media S.A. | |
dc.identifier.doi | 10.3389/frobt.2020.00106 | |
dc.relation.uri | https://www.frontiersin.org/articles/10.3389/frobt.2020.00106/full | |
dc.subject | medical image segmentation | en |
dc.subject | CNN | en |
dc.subject | UNet | en |
dc.subject | VNet | en |
dc.subject | attention gates | en |
dc.subject | deep supervision | en |
dc.subject | tumor segmentation | en |
dc.subject | organ segmentation | en |
dc.description.abstract | Computer Tomography (CT) is an imaging procedure that combines many X-ray measurements taken from different angles. The segmentation of areas in the CT images provides a valuable aid to physicians and radiologists in order to better provide a patient diagnose. The CT scans of a body torso usually include different neighboring internal body organs. Deep learning has become the state-of-the-art in medical image segmentation. For such techniques, in order to perform a successful segmentation, it is of great importance that the network learns to focus on the organ of interest and surrounding structures and also that the network can detect target regions of different sizes. In this paper, we propose the extension of a popular deep learning methodology, Convolutional Neural Networks (CNN), by including deep supervision and attention gates. Our experimental evaluation shows that the inclusion of attention and deep supervision results in consistent improvement of the tumor prediction accuracy across the different datasets and training sizes while adding minimal computational overhead. © Copyright © 2020 Turečková, Tureček, Komínková Oplatková and Rodríguez-Sánchez. | en |
utb.faculty | Faculty of Applied Informatics | |
dc.identifier.uri | http://hdl.handle.net/10563/1009910 | |
utb.identifier.obdid | 43881327 | |
utb.identifier.scopus | 2-s2.0-85090765676 | |
utb.identifier.wok | 000570414900001 | |
utb.source | j-scopus | |
dc.date.accessioned | 2020-09-25T13:44:07Z | |
dc.date.available | 2020-09-25T13:44:07Z | |
dc.description.sponsorship | Internal Grant Agency of Tomas Bata University [IGA/CebiaTech/2020/001]; COST (European Cooperation in Science Technology) [CA15140]; program Projects of Large Research, Development, and Innovations Infrastructures [e-INFRA LM2018140] | |
dc.rights | Attribution 4.0 International | |
dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ | |
dc.rights.access | openAccess | |
utb.ou | CEBIA-Tech | |
utb.contributor.internalauthor | Turečková, Alžběta | |
utb.contributor.internalauthor | Tureček, Tomáš | |
utb.contributor.internalauthor | Komínková Oplatková, Zuzana | |
utb.fulltext.affiliation | Alžbeta Turečková 1*, Tomáš Tureček 1, Zuzana Komínková Oplatková 1, Antonio Rodríguez-Sánchez 2 1 Artificial Intelligence Laboratory, Faculty of Applied Informatics, Tomas Bata University in Zlin, Zlin, Czechia, 2 Intelligent and Interactive Systems, Department of Computer Science, University of Innsbruck, Innsbruck, Austria * Correspondence: Alžbeta Turečková [email protected] | |
utb.fulltext.dates | Received: 31 July 2019 Accepted: 07 July 2020 Published: 28 August 2020 | |
utb.fulltext.sponsorship | This paper was created with support of A.I. Lab (ailab.fai.utb.cz) from Tomas Bata University in Zlin and IIS group at the University of Innsbruck (iis.uibk.ac.at). Funding. This work was supported by Internal Grant Agency of Tomas Bata University under the Project no. IGA/CebiaTech/2020/001, and by COST (European Cooperation in Science & Technology) under Action CA15140, Improving Applicability of Nature-Inspired Optimization by Joining Theory and Practice (ImAppNIO). Finally, the access to computational resources supplied by the project e-Infrastruktura CZ (e-INFRA LM2018140) provided within the program Projects of Large Research, Development, and Innovations Infrastructures, is greatly appreciated. | |
utb.wos.affiliation | [Tureckova, Alzbeta; Turecek, Tomas; Kominkova Oplatkova, Zuzana] Tomas Bata Univ Zlin, Fac Appl Informat, Artificial Intelligence Lab, Zlin, Czech Republic; [Rodriguez-Sanchez, Antonio] Univ Innsbruck, Dept Comp Sci, Intelligent & Interact Syst, Innsbruck, Austria | |
utb.scopus.affiliation | Artificial Intelligence Laboratory, Faculty of Applied Informatics, Tomas Bata University in Zlin, Zlin, Czech Republic; Intelligent and Interactive Systems, Department of Computer Science, University of Innsbruck, Innsbruck, Austria | |
utb.fulltext.projects | IGA/CebiaTech/2020/001 | |
utb.fulltext.projects | CA15140 | |
utb.fulltext.projects | ImAppNIO | |
utb.fulltext.projects | e-INFRA LM2018140 | |
utb.fulltext.faculty | Faculty of Applied Informatics | |
utb.fulltext.faculty | Faculty of Applied Informatics | |
utb.fulltext.faculty | Faculty of Applied Informatics | |
utb.fulltext.ou | Artificial Intelligence Laboratory | |
utb.fulltext.ou | Artificial Intelligence Laboratory | |
utb.fulltext.ou | Artificial Intelligence Laboratory |